ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A5K4EPM2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4EPM2_F1_nD1

A0A5K4EPM2_F1_nD1

UID: 003495127

AlphaFold

Range: 43-320
AlphaFold: AF-A0A5K4EPM2
UniProt: A0A5K4EPM2 (all domains)

Protein: Putative nachr subunit

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD,Neur_chan_memb →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD,Neur_chan_memb(11.12.1.2)

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

PF02932Neur_chan_memb

Neurotransmitter-gated ion-channel transmembrane region

ClanCL0975NLGIC_TM

External Links

AlphaFold DB: A0A5K4EPM2 UniProt: A0A5K4EPM2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 43-320