ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A3Q0KIV8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A3Q0KIV8_F1_nD2

A0A3Q0KIV8_F1_nD2

UID: 003495820

AlphaFold

Range: 336-695
AlphaFold: AF-A0A3Q0KIV8
UniProt: A0A3Q0KIV8 (all domains)

Protein: Pcd6 interacting protein-related

3D Structure

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Related Domains

Browse other domains in ALIX_LYPXL_bnd →

Classification

AArchitecturealpha duplicates or obligate multimers(a.8)

XX-groupAlix V domain(3285)

HH-groupAlix V domain(3285.1)

TT-groupAlix V domain(3285.1.1)

FFamilyALIX_LYPXL_bnd(3285.1.1.1)

Pfam Families

PF13949ALIX_LYPXL_bnd

ALIX V-shaped domain binding to HIV

External Links

AlphaFold DB: A0A3Q0KIV8 UniProt: A0A3Q0KIV8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 336-695