ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A5K4EPZ7_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4EPZ7_F1_nD4

A0A5K4EPZ7_F1_nD4

UID: 003495880

AlphaFold

Range: 696-900,961-1055,1226-1275,1301-1375
AlphaFold: AF-A0A5K4EPZ7
UniProt: A0A5K4EPZ7 (all domains)

Protein: 5'-3' exoribonuclease, putative

3D Structure

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Related Domains

Browse other domains in SH3_12, XRN1_D1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilySH3_12, XRN1_D1(4.1.1.315)

Pfam Families

Xrn1 SH3-like domain

ClanCL0010SH3

PF18332XRN1_D1

Exoribonuclease Xrn1 D1 domain

ClanCL0010SH3

External Links

AlphaFold DB: A0A5K4EPZ7 UniProt: A0A5K4EPZ7

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 696-900,961-1055,1226-1275,1301-1375