ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2qadD1 - ECOD Domain | ECOD

ECOD/Domains/e2qadD1

e2qadD1

UID: 000034961

PDB

Range: D:1-113
PDB: 2QAD chain D(all domains)
UniProt: A4F255 (all domains)
Gene: VHCH1

Molecule: anti-HIV-1 antibody 412d heavy chain

3D Structure

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Related Domains

Browse other domains in V-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set(11.1.1.99)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Immunoglobulin V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 2QAD RCSB PDB: 2QAD PDBe: 2QAD UniProt: A4F255

Downloads

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