ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A5K4FAI1_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4FAI1_F1_nD4

A0A5K4FAI1_F1_nD4

UID: 003496492

AlphaFold

Range: 1081-1100,1131-1260,1361-1500
AlphaFold: AF-A0A5K4FAI1
UniProt: A0A5K4FAI1 (all domains)

Protein: DNA polymerase zeta catalytic subunit (EC 2.7.7.7)

3D Structure

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Related Domains

Browse other domains in DNA_pol_B_exo1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDNA_pol_B_exo1(2484.1.1.34)

Pfam Families

PF03104DNA_pol_B_exo1

DNA polymerase family B, exonuclease domain

ClanCL0219RNase_H

External Links

AlphaFold DB: A0A5K4FAI1 UniProt: A0A5K4FAI1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1081-1100,1131-1260,1361-1500