ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A5K4FGM8_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4FGM8_F1_nD4

A0A5K4FGM8_F1_nD4

UID: 003498091

AlphaFold

Range: 1621-1630,1736-1765,1786-1875
AlphaFold: AF-A0A5K4FGM8
UniProt: A0A5K4FGM8 (all domains)

Protein: E3 ubiquitin-protein ligase listerin (EC 2.3.2.27) (RING-type E3 ubiquitin transferase listerin)

3D Structure

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Related Domains

Browse other domains in UBC_like →

Classification

AArchitecturea+b two layers(a.11)

XX-groupUBC-like(216)

HH-groupUBC-like(216.1)

TT-groupUBC-like(216.1.1)

FFamilyUBC_like(216.1.1.20)

Pfam Families

PF23009UBC_like

Ubiquitin conjugating domain-like

ClanCL0208UBC

External Links

AlphaFold DB: A0A5K4FGM8 UniProt: A0A5K4FGM8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1621-1630,1736-1765,1786-1875