ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A5K4F9T5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4F9T5_F1_nD1

A0A5K4F9T5_F1_nD1

UID: 003498846

RepresentativeAlphaFold

Range: 6-55,77-129,153-170,191-240
AlphaFold: AF-A0A5K4F9T5
UniProt: A0A5K4F9T5 (all domains)

Protein: Mediator of RNA polymerase II transcription subunit 13

3D Structure

Loading viewer...

Related Domains

Browse other domains in Mat89Bb →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSPOC domain-like(60)

HH-groupSPOC domain-related(60.1)

TT-groupSPOC domain(60.1.1)

FFamilyMat89Bb(60.1.1.6)

Pfam Families

PF10221Mat89Bb

Cell cycle and development regulator Mat89Bb

External Links

AlphaFold DB: A0A5K4F9T5 UniProt: A0A5K4F9T5

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-55,77-129,153-170,191-240