ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A077ZBD6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A077ZBD6_F1_nD1

A0A077ZBD6_F1_nD1

UID: 003502437

AlphaFold

Range: 66-440
UniProt: A0A077ZBD6 (all domains)
Gene: TTRE_0000594401

Protein: Probable DNA-directed RNA polymerase II subunit RPB11 (DNA-directed RNA polymerase II subunit J)

3D Structure

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Related Domains

Browse other domains in GTP_EFTU,EFTUD2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyGTP_EFTU,EFTUD2(2004.1.1.15)

Pfam Families

PF00009GTP_EFTU

Elongation factor Tu GTP binding domain

ClanCL0023P-loop_NTPase

116 kDa U5 small nuclear ribonucleoprotein component N-terminus

External Links

UniProt: A0A077ZBD6

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