ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A077ZKV3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A077ZKV3_F1_nD1

A0A077ZKV3_F1_nD1

UID: 003505300

AlphaFold

Range: 1-490
AlphaFold: AF-A0A077ZKV3
UniProt: A0A077ZKV3 (all domains)
Gene: TTRE_0000871101

Protein: Protein SMG5

3D Structure

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Related Domains

Browse other domains in EST1_DNA_bind →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyEST1_DNA_bind(109.4.1.147)

Pfam Families

PF10373EST1_DNA_bind

Est1 DNA/RNA binding domain

ClanCL0020TPR

External Links

AlphaFold DB: A0A077ZKV3 UniProt: A0A077ZKV3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-490