ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A077YY56_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A077YY56_F1_nD1

A0A077YY56_F1_nD1

UID: 003505667

AlphaFold

Range: 21-110
UniProt: A0A077YY56 (all domains)
Gene: TTRE_0000097301

Protein: Upf3 regulator of nonsense transcripts-like prote in

3D Structure

Loading viewer...

Related Domains

Browse other domains in Smg4_UPF3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilySmg4_UPF3(304.9.1.6)

Pfam Families

PF03467Smg4_UPF3

Smg-4/UPF3 family

ClanCL0221RRM

External Links

UniProt: A0A077YY56

Downloads