ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A077YXM2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A077YXM2_F1_nD1

A0A077YXM2_F1_nD1

UID: 003508061

AlphaFold

Range: 1-410
AlphaFold: AF-A0A077YXM2
UniProt: A0A077YXM2 (all domains)
Gene: TTRE_0000079601

Protein: E3 ubiquitin protein ligase HERC4

3D Structure

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Related Domains

Browse other domains in RCC1, RCC1_2, WD40_RLD →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyRCC1, RCC1_2, WD40_RLD(5.1.4.255)

Pfam Families

Regulator of chromosome condensation (RCC1) repeat

ClanCL0186Beta_propeller

Regulator of chromosome condensation (RCC1) repeat

ClanCL0186Beta_propeller

PF25390WD40_RLD

RCC1-like domain

ClanCL0186Beta_propeller

External Links

AlphaFold DB: A0A077YXM2 UniProt: A0A077YXM2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-410