ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3dyoA2 - ECOD Domain | ECOD

ECOD/Domains/e3dyoA2

e3dyoA2

UID: 000350903

PDB

Range: A:220-333
PDB: 3DYO chain A(all domains)
UniProt: P00722 (all domains)
Gene: lacZ

Molecule: Beta-galactosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyGlyco_hydro_2(11.1.1.14)

Ligands

in contact, ≤ 4 Å

Isopropyl beta-D-thiogalactopyranosideIPT
drugDrugBank DB01862
Magnesium ionMG
metalwithin 5 Å only

+ 1 additive (Dimethyl sulfoxide)

Pfam Families

PF00703Glyco_hydro_2

Glycosyl hydrolases family 2

ClanCL0159E-set

External Links

ECOD PDB View: 3DYO RCSB PDB: 3DYO PDBe: 3DYO UniProt: P00722

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Dimethyl sulfoxideDMS

Shown in the structure viewer. Drug annotations from DrugDomain.