ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A077ZGL4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A077ZGL4_F1_nD1

A0A077ZGL4_F1_nD1

UID: 003509415

AlphaFold

Range: 11-85
AlphaFold: AF-A0A077ZGL4
UniProt: A0A077ZGL4 (all domains)
Gene: TTRE_0000710801

Protein: RNA polymerase principal sigma factor HrdB

3D Structure

Loading viewer...

Related Domains

Browse other domains in Sigma70_r1_1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRNA polymerase sigma factor rpoD N-terminal domain(3498)

HH-groupRNA polymerase sigma factor rpoD N-terminal domain(3498.1)

TT-groupRNA polymerase sigma factor rpoD N-terminal domain(3498.1.1)

FFamilySigma70_r1_1(3498.1.1.2)

Pfam Families

PF03979Sigma70_r1_1

Sigma-70 factor, region 1.1

External Links

AlphaFold DB: A0A077ZGL4 UniProt: A0A077ZGL4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 11-85