ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A077ZB80_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A0A077ZB80_F1_nD1

A0A077ZB80_F1_nD1

UID: 003510234

AlphaFold

Range: 1-75
AlphaFold: AF-A0A077ZB80
UniProt: A0A077ZB80 (all domains)
Gene: TTRE_0000588801

Protein: tRNA:m(4)X modification enzyme TRM13 (EC 2.1.1.225)

3D Structure

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Related Domains

Browse other domains in EF-hand_1, EF-hand_5, EF-hand_7 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupEF-hand(108)

HH-groupEF-hand-related(108.1)

TT-groupEF-hand(108.1.1)

FFamilyEF-hand_1, EF-hand_5, EF-hand_7(108.1.1.98)

Pfam Families

PF00036EF-hand_1

EF hand domain

ClanCL0220EF_hand

PF13202EF-hand_5

EF hand

ClanCL0220EF_hand

PF13499EF-hand_7

EF-hand domain pair

ClanCL0220EF_hand

External Links

AlphaFold DB: A0A077ZB80 UniProt: A0A077ZB80

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-75