ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A077ZKB3_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A077ZKB3_F1_nD3

A0A077ZKB3_F1_nD3

UID: 003511735

AlphaFold

Range: 396-480
AlphaFold: AF-A0A077ZKB3
UniProt: A0A077ZKB3 (all domains)
Gene: TTRE_0000918201

Protein: Zinc knuckle protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Retrotran_gag_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyRetrotran_gag_2(170.2.1.13)

Pfam Families

PF14223Retrotran_gag_2

gag-polypeptide of LTR copia-type

ClanCL0523GAG-polyprotein

External Links

AlphaFold DB: A0A077ZKB3 UniProt: A0A077ZKB3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 396-480