ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A077ZGF5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A077ZGF5_F1_nD2

A0A077ZGF5_F1_nD2

UID: 003512551

AlphaFold

Range: 226-320,366-535
AlphaFold: AF-A0A077ZGF5
UniProt: A0A077ZGF5 (all domains)
Gene: TTRE_0000701301

Protein: 5' 3' exoribonuclease 1

3D Structure

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Related Domains

Browse other domains in XRN_M →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHelical domain in 5'->3' exoribonucleases(3279)

HH-groupHelical domain in 5'->3' exoribonucleases(3279.1)

TT-groupHelical domain in 5'->3' exoribonucleases(3279.1.1)

FFamilyXRN_M(3279.1.1.1)

Pfam Families

Xrn1 helical domain

External Links

AlphaFold DB: A0A077ZGF5 UniProt: A0A077ZGF5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 226-320,366-535