ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A077ZFD1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A077ZFD1_F1_nD2

A0A077ZFD1_F1_nD2

UID: 003514581

AlphaFold

Range: 66-140
AlphaFold: AF-A0A077ZFD1
UniProt: A0A077ZFD1 (all domains)
Gene: TTRE_0000744201

Protein: Signal peptidase complex catalytic subunit SEC11 (EC 3.4.21.89)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RRP40_S1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRRP40_S1(2.1.1.107)

Pfam Families

PF21262RRP40_S1

Exosome complex component RRP40, S1 domain

ClanCL0021OB

External Links

AlphaFold DB: A0A077ZFD1 UniProt: A0A077ZFD1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-140