ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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A0A077ZFE4_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A077ZFE4_F1_nD2

A0A077ZFE4_F1_nD2

UID: 003514631

AlphaFold

Range: 286-409
AlphaFold: AF-A0A077ZFE4
UniProt: A0A077ZFE4 (all domains)
Gene: TTRE_0000564601

Protein: PAB dependent poly(A) specific ribonuclease

3D Structure

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Related Domains

Browse other domains in Pan3_PK →

Classification

AArchitecturealpha arrays(a.6)

XX-groupDimerization domain in caprin-1 and PAN3(1016)

HH-groupDimerization domain in caprin-1 and PAN3(1016.1)

TT-groupDimerization domain in caprin-1 and PAN3(1016.1.1)

FFamilyPan3_PK(1016.1.1.1)

Pfam Families

PF18101Pan3_CK

Pan3 C-terminal knob domain

External Links

AlphaFold DB: A0A077ZFE4 UniProt: A0A077ZFE4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 286-409