ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A077ZEQ3_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/A0A077ZEQ3_F1_nD3

A0A077ZEQ3_F1_nD3

UID: 003517397

AlphaFold

Range: 496-580
AlphaFold: AF-A0A077ZEQ3
UniProt: A0A077ZEQ3 (all domains)
Gene: TTRE_0000715701

Protein: DNA-directed RNA polymerase (EC 2.7.7.6)

3D Structure

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Related Domains

Browse other domains in RNA_pol_Rpb2_4 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupinserted a+b domain in yeast RNA polymerase beta subunit(4961)

HH-groupinserted a+b domain in yeast RNA polymerase beta subunit(4961.1)

TT-groupinserted a+b domain in yeast RNA polymerase beta subunit(4961.1.1)

FFamilyRNA_pol_Rpb2_4(4961.1.1.1)

Pfam Families

PF04566RNA_pol_Rpb2_4

RNA polymerase Rpb2, domain 4

External Links

AlphaFold DB: A0A077ZEQ3 UniProt: A0A077ZEQ3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 496-580