ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q8IVU3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q8IVU3_F1_nD1

Q8IVU3_F1_nD1

UID: 003523499

AlphaFold

Range: 16-370
AlphaFold: AF-Q8IVU3
UniProt: Q8IVU3 (all domains)
Gene: HERC6

Protein: Probable E3 ubiquitin-protein ligase HERC6 (EC 2.3.2.26) (HECT domain and RCC1-like domain-containing protein 6) (HECT-type E3 ubiquitin transferase HERC6)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RCC1, RCC1_2, WD40_RLD →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyRCC1, RCC1_2, WD40_RLD(5.1.4.255)

Pfam Families

Regulator of chromosome condensation (RCC1) repeat

ClanCL0186Beta_propeller

Regulator of chromosome condensation (RCC1) repeat

ClanCL0186Beta_propeller

PF25390WD40_RLD

RCC1-like domain

ClanCL0186Beta_propeller

External Links

AlphaFold DB: Q8IVU3 UniProt: Q8IVU3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-370