ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P13473_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/P13473_F1_nD3

P13473_F1_nD3

UID: 003523593

AlphaFold

Range: 376-400
AlphaFold: AF-P13473
UniProt: P13473 (all domains)
Gene: LAMP2

Protein: Lysosome-associated membrane glycoprotein 2 (LAMP-2) (Lysosome-associated membrane protein 2) (CD107 antigen-like family member B) (LGP-96) (CD antigen CD107b)

3D Structure

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Related Domains

Browse other domains in Lamp2_2nd →

Classification

AArchitectureextended segments(a.20)

XX-groupTransmembrane segment of lysosome-associated membrane glycoprotein 2(6169)

HH-groupTransmembrane segment of lysosome-associated membrane glycoprotein 2(6169.1)

TT-groupTransmembrane segment of lysosome-associated membrane glycoprotein 2(6169.1.1)

FFamilyLamp2_2nd(6169.1.1.6)

Pfam Families

PF21222Lamp2_2nd

Lysosome-associated membrane glycoprotein 2, transmembrane segment

External Links

AlphaFold DB: P13473 UniProt: P13473

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 376-400