ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8IZ13_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8IZ13_F1_nD2

Q8IZ13_F1_nD2

UID: 003527214

AlphaFold

Range: 91-300,326-594
AlphaFold: AF-Q8IZ13
UniProt: Q8IZ13 (all domains)
Gene: FAM200C

Protein: Protein FAM200C (Protein ZBED8) (Transposon-derived Buster3 transposase-like protein) (Zinc finger BED domain-containing protein 8)

3D Structure

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Related Domains

Browse other domains in FAM200-GTF2IRD2-like, FAM200-ZBED5_RNase-like →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyFAM200-GTF2IRD2-like, FAM200-ZBED5_RNase-like(2484.1.1.204)

Pfam Families

PF27046FAM200-GTF2IRD2-like

FAM200/GTF2IRD2 helical domain

ClanCL0219RNase_H

PF27073FAM200-ZBED5_RNase-like

FAM200/ZBED5 RNase-like

ClanCL0219RNase_H

External Links

AlphaFold DB: Q8IZ13 UniProt: Q8IZ13

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 91-300,326-594