ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5VV42_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5VV42_F1_nD1

Q5VV42_F1_nD1

UID: 003528920

AlphaFold

Range: 61-200
AlphaFold: AF-Q5VV42
UniProt: Q5VV42 (all domains)
Gene: CDKAL1

Protein: Threonylcarbamoyladenosine tRNA methylthiotransferase (EC 2.8.4.5) (CDK5 regulatory subunit-associated protein 1-like 1) (tRNA-t(6)A37 methylthiotransferase)

3D Structure

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Related Domains

Browse other domains in UPF0004 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupCheY-like(2007.1.3)

FFamilyUPF0004(2007.1.3.2)

Pfam Families

PF00919UPF0004

Uncharacterized protein family UPF0004

ClanCL0304CheY

External Links

AlphaFold DB: Q5VV42 UniProt: Q5VV42

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 61-200