ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5T6F2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5T6F2_F1_nD1

Q5T6F2_F1_nD1

UID: 003529713

AlphaFold

Range: 26-95
AlphaFold: AF-Q5T6F2
UniProt: Q5T6F2 (all domains)
Gene: UBAP2

Protein: Ubiquitin-associated protein 2 (UBAP-2) (RNA polymerase II degradation factor UBAP2)

3D Structure

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Related Domains

Browse other domains in UBA_UBAP2 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupRuvA-C, UBA, CRAL/TRIO-N, HBS1(103.1)

TT-groupUBA-like domain(103.1.1)

FFamilyUBA_UBAP2(103.1.1.84)

Pfam Families

PF28540UBA_UBAP2

Ubiquitin-associated protein 2, UBA domain

ClanCL0214UBA

External Links

AlphaFold DB: Q5T6F2 UniProt: Q5T6F2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-95