ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

P39880_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/P39880_F1_nD5

P39880_F1_nD5

UID: 003530842

AlphaFold

Range: 541-635
AlphaFold: AF-P39880
UniProt: P39880 (all domains)
Gene: CUX1

Protein: Homeobox protein cut-like 1 (CCAAT displacement protein) (CDP) (CDP/Cux p200) (Homeobox protein cux-1) [Cleaved into: CDP/Cux p110]

3D Structure

Loading viewer...

Related Domains

Browse other domains in CUT →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-grouptetra-helical, lambda repressor-like(101.1.4)

FFamilyCUT(101.1.4.4)

Pfam Families

CUT domain

ClanCL0123HTH

External Links

AlphaFold DB: P39880 UniProt: P39880

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 541-635