ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9NRE1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9NRE1_F1_nD2

Q9NRE1_F1_nD2

UID: 003531957

AlphaFold

Range: 71-255
AlphaFold: AF-Q9NRE1
UniProt: Q9NRE1 (all domains)
Gene: MMP26

Protein: Matrix metalloproteinase-26 (MMP-26) (EC 3.4.24.-) (Endometase) (Matrilysin-2)

3D Structure

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Related Domains

Browse other domains in Peptidase_M10 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M10(2498.1.1.1)

Ligands

in contact, ≤ 4 Å

Marimastat
drugDrugBank DB00786within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00413Peptidase_M10

Matrixin

ClanCL0126Peptidase_MA

External Links

AlphaFold DB: Q9NRE1 UniProt: Q9NRE1

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 71-255