ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B2RPK0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/B2RPK0_F1_nD1

B2RPK0_F1_nD1

UID: 003532587

AlphaFold

Range: 6-80
AlphaFold: AF-B2RPK0
UniProt: B2RPK0 (all domains)
Gene: HMGB1P1

Protein: High mobility group protein B1-like 1 (High mobility group protein 1-like 1) (HMG-1L1)

3D Structure

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Related Domains

Browse other domains in HMG_box_2 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHMG-box-like(190)

HH-groupHMG-box(190.1)

TT-groupHMG-box(190.1.1)

FFamilyHMG_box_2(190.1.1.3)

Pfam Families

PF09011HMG_box_2

HMG-box domain

ClanCL0114HMG-box

External Links

AlphaFold DB: B2RPK0 UniProt: B2RPK0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-80