ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5VT97_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5VT97_F1_nD1

Q5VT97_F1_nD1

UID: 003533379

AlphaFold

Range: 676-795
AlphaFold: AF-Q5VT97
UniProt: Q5VT97 (all domains)
Gene: SYDE2

Protein: Rho GTPase-activating protein SYDE2 (Synapse defective protein 1 homolog 2) (Protein syd-1 homolog 2)

3D Structure

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Related Domains

Browse other domains in C2_SYDE →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupC2 domain(11.2)

TT-groupC2 domain(11.2.1)

FFamilyC2_SYDE(11.2.1.55)

Pfam Families

PF25336C2_SYDE

C2 domain of synapse defective Rho GAP protein

ClanCL0154C2

External Links

AlphaFold DB: Q5VT97 UniProt: Q5VT97

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 676-795