ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q9HDB9_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q9HDB9_F1_nD5

Q9HDB9_F1_nD5

UID: 003533532

AlphaFold

Range: 576-600
UniProt: Q9HDB9 (all domains)
Gene: ERVK-5

Protein: Endogenous retrovirus group K member 5 Gag polyprotein (HERV-K(II) Gag protein) (HERV-K_3q12.3 provirus ancestral Gag polyprotein) (Gag polyprotein)

3D Structure

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Related Domains

Browse other domains in zf-CCHC_5 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCCHC-type 1 zinc finger(396)

HH-groupRetrovirus zinc finger-related domains(396.1)

TT-groupRetrovirus zinc finger-related domains(396.1.1)

FFamilyzf-CCHC_5(396.1.1.4)

Pfam Families

PF14787zf-CCHC_5

GAG-polyprotein viral zinc-finger

ClanCL0511Retroviral_zf

External Links

UniProt: Q9HDB9

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