ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8IZH2_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q8IZH2_F1_nD4

Q8IZH2_F1_nD4

UID: 003533686

AlphaFold

Range: 646-910,1051-1175
AlphaFold: AF-Q8IZH2
UniProt: Q8IZH2 (all domains)
Gene: XRN1

Protein: 5'-3' exoribonuclease 1 (EC 3.1.13.-) (Strand-exchange protein 1 homolog)

3D Structure

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Related Domains

Browse other domains in SH3_12, XRN1_D1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilySH3_12, XRN1_D1(4.1.1.315)

Pfam Families

Xrn1 SH3-like domain

ClanCL0010SH3

PF18332XRN1_D1

Exoribonuclease Xrn1 D1 domain

ClanCL0010SH3

External Links

AlphaFold DB: Q8IZH2 UniProt: Q8IZH2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 646-910,1051-1175