ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8IZH2_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/Q8IZH2_F1_nD5

Q8IZH2_F1_nD5

UID: 003533687

AlphaFold

Range: 911-1045
AlphaFold: AF-Q8IZH2
UniProt: Q8IZH2 (all domains)
Gene: XRN1

Protein: 5'-3' exoribonuclease 1 (EC 3.1.13.-) (Strand-exchange protein 1 homolog)

3D Structure

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Related Domains

Browse other domains in XRN1_D2_D3 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyXRN1_D2_D3(101.1.2.167)

Pfam Families

PF18334XRN1_D2_D3

Exoribonuclease Xrn1 D2/D3 domain

ClanCL0010SH3

External Links

AlphaFold DB: Q8IZH2 UniProt: Q8IZH2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 911-1045