ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q9HB58_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9HB58_F1_nD3

Q9HB58_F1_nD3

UID: 003539111

AlphaFold

Range: 531-585
AlphaFold: AF-Q9HB58
UniProt: Q9HB58 (all domains)
Gene: SP110

Protein: Sp110 nuclear body protein (Interferon-induced protein 41/75) (Speckled 110 kDa) (Transcriptional coactivator Sp110)

3D Structure

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Related Domains

Browse other domains in PHD →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD(376.1.3.1)

Pfam Families

PHD-finger

ClanCL0229RING

External Links

AlphaFold DB: Q9HB58 UniProt: Q9HB58

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 531-585