ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P16989_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P16989_F1_nD1

P16989_F1_nD1

UID: 003539216

AlphaFold

Range: 86-170
AlphaFold: AF-P16989
UniProt: P16989 (all domains)
Gene: YBX3

Protein: Y-box-binding protein 3 (Cold shock domain-containing protein A) (DNA-binding protein A) (Single-strand DNA-binding protein NF-GMB)

3D Structure

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Related Domains

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Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyCSD(2.1.1.3)

Pfam Families

'Cold-shock' DNA-binding domain

ClanCL0021OB

External Links

AlphaFold DB: P16989 UniProt: P16989

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 86-170