ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5T4T6_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5T4T6_F1_nD2

Q5T4T6_F1_nD2

UID: 003539219

AlphaFold

Range: 291-405
AlphaFold: AF-Q5T4T6
UniProt: Q5T4T6 (all domains)
Gene: SYCP2L

Protein: Synaptonemal complex protein 2-like (SCP-2-like) (145 kDa nucleolar protein homolog) (hsNO145)

3D Structure

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Related Domains

Browse other domains in SYCP2_SLD →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPH domain-like(220)

HH-groupPH domain-like(220.1)

TT-groupPH domain-like(220.1.1)

FFamilySYCP2_SLD(220.1.1.55)

Pfam Families

PF18584SYCP2_SLD

Synaptonemal complex 2 Spt16M-like domain

ClanCL0266PH

External Links

AlphaFold DB: Q5T4T6 UniProt: Q5T4T6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 291-405