ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5ST30_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5ST30_F1_nD2

Q5ST30_F1_nD2

UID: 003539624

AlphaFold

Range: 96-315,461-535,576-710
AlphaFold: AF-Q5ST30
UniProt: Q5ST30 (all domains)
Gene: VARS2

Protein: Valine--tRNA ligase, mitochondrial (EC 6.1.1.9) (Valyl-tRNA synthetase) (ValRS) (Valyl-tRNA synthetase-like)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1+tRNA-synt_1g →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1+tRNA-synt_1g(2005.1.1.40)

Pfam Families

PF00133tRNA-synt_1

tRNA synthetases class I (I, L, M and V)

ClanCL0039HUP

PF09334tRNA-synt_1g

tRNA synthetases class I (M)

ClanCL0039HUP

External Links

AlphaFold DB: Q5ST30 UniProt: Q5ST30

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 96-315,461-535,576-710