ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q86V20_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q86V20_F1_nD2

Q86V20_F1_nD2

UID: 003541127

AlphaFold

Range: 581-655
AlphaFold: AF-Q86V20
UniProt: Q86V20 (all domains)
Gene: SHLD2

Protein: Shieldin complex subunit 2 (Protein FAM35A) (RINN1-REV7-interacting novel NHEJ regulator 2) (Shield complex subunit 2)

3D Structure

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Related Domains

Browse other domains in SHLD2_OB2 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilySHLD2_OB2(2.1.1.170)

Pfam Families

PF22779OB_SHLD2_2nd

Shieldin complex subunit 2, second OB fold domain

ClanCL0021OB

External Links

AlphaFold DB: Q86V20 UniProt: Q86V20

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 581-655