ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A6NL88_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/A6NL88_F1_nD1

A6NL88_F1_nD1

UID: 003542608

AlphaFold

Range: 82-129
AlphaFold: AF-A6NL88
UniProt: A6NL88 (all domains)
Gene: SHISA7

Protein: Protein shisa-7 (Cystine-knot AMPAR modulating protein of 59 kDa) (CKAMP59) (GABA(A) receptor auxiliary subunit Shisa7) (Protein shisa-6-like)

3D Structure

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Related Domains

Browse other domains in Shisa_N →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupShisa 3 N-terminal domain(1155)

HH-groupShisa 3 N-terminal domain(1155.1)

TT-groupShisa 3 N-terminal domain(1155.1.1)

FFamilyShisa_N(1155.1.1.1)

Pfam Families

PF13908Shisa_N

Shisa, N-terminal domain

External Links

AlphaFold DB: A6NL88 UniProt: A6NL88

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 82-129