ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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O60542_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/O60542_F1_nD1

O60542_F1_nD1

UID: 003543110

AlphaFold

Range: 56-155
AlphaFold: AF-O60542
UniProt: O60542 (all domains)
Gene: PSPN

Protein: Persephin (PSP)

3D Structure

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Related Domains

Browse other domains in TGF_beta →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCystine-knot cytokines(385)

HH-groupCystine-knot cytokines(385.1)

TT-groupCystine-knot cytokines(385.1.1)

FFamilyTGF_beta(385.1.1.2)

Pfam Families

PF00019TGF_beta

Transforming growth factor beta like domain

ClanCL0079Cystine-knot

External Links

AlphaFold DB: O60542 UniProt: O60542

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 56-155