ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8N119_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8N119_F1_nD2

Q8N119_F1_nD2

UID: 003546879

AlphaFold

Range: 36-45,161-330
AlphaFold: AF-Q8N119
UniProt: Q8N119 (all domains)
Gene: MMP21

Protein: Matrix metalloproteinase-21 (MMP-21) (EC 3.4.24.-)

3D Structure

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Related Domains

Browse other domains in Peptidase_M10 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M10(2498.1.1.1)

Ligands

in contact, ≤ 4 Å

Marimastat
drugDrugBank DB00786within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00413Peptidase_M10

Matrixin

ClanCL0126Peptidase_MA

External Links

AlphaFold DB: Q8N119 UniProt: Q8N119

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-45,161-330