ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P84098_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P84098_F1_nD2

P84098_F1_nD2

UID: 003548652

AlphaFold

Range: 56-195
AlphaFold: AF-P84098
UniProt: P84098 (all domains)
Gene: RPL19

Protein: Large ribosomal subunit protein eL19 (60S ribosomal protein L19)

3D Structure

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Related Domains

Browse other domains in Ribosomal_L19e_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRibosomal protein L19 (L19e) C-terminal domain(3050)

HH-groupRibosomal protein L19 (L19e) C-terminal domain(3050.1)

TT-groupRibosomal protein L19 (L19e) C-terminal domain(3050.1.1)

FFamilyRibosomal_L19e_C(3050.1.1.7)

Ligands

in contact, ≤ 4 Å

(S)-3-phenyllactic acid
drugDrugBank DB02494within 5 Å only
DB07374
drugDrugBank DB07374within 5 Å only
Puromycin

Pfam Families

PF25476Ribosomal_L19e_C

Ribosomal protein L19e, C-terminal domain

External Links

AlphaFold DB: P84098 UniProt: P84098

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 56-195

drugDrugBank DB08437within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.