ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P28340_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/P28340_F1_nD6

P28340_F1_nD6

UID: 003549728

AlphaFold

Range: 831-990
AlphaFold: AF-P28340
UniProt: P28340 (all domains)
Gene: POLD1

Protein: DNA polymerase delta catalytic subunit (EC 2.7.7.7) (3'-5' exodeoxyribonuclease) (EC 3.1.11.-) (DNA polymerase subunit delta p125)

3D Structure

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Related Domains

Browse other domains in DNA_pol_B →

Classification

AArchitecturealpha bundles(a.7)

XX-group"thumb" domain in bacteriophage RB69-like DNA polymerase I(4969)

HH-group"thumb" domain in bacteriophage RB69-like DNA polymerase I(4969.1)

TT-group"thumb" domain in bacteriophage RB69-like DNA polymerase I(4969.1.1)

FFamilyDNA_pol_B(4969.1.1.1)

Pfam Families

PF00136DNA_pol_B

DNA polymerase family B

ClanCL0194DNA_pol_B-like

External Links

AlphaFold DB: P28340 UniProt: P28340

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 831-990