ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P11387_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P11387_F1_nD1

P11387_F1_nD1

UID: 003549794

AlphaFold

Range: 231-325
AlphaFold: AF-P11387
UniProt: P11387 (all domains)
Gene: TOP1

Protein: DNA topoisomerase 1 (EC 5.6.2.1) (DNA topoisomerase I)

3D Structure

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Related Domains

Browse other domains in Topoisom_I_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupAlpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment(4057)

HH-groupAlpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment(4057.1)

TT-groupAlpha-helical domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment(4057.1.1)

FFamilyTopoisom_I_N(4057.1.1.1)

Pfam Families

PF02919Topoisom_I_N

Eukaryotic DNA topoisomerase I, DNA binding fragment

External Links

AlphaFold DB: P11387 UniProt: P11387

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 231-325