ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9Y5P6_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9Y5P6_F1_nD2

Q9Y5P6_F1_nD2

UID: 003550493

AlphaFold

Range: 246-360
AlphaFold: AF-Q9Y5P6
UniProt: Q9Y5P6 (all domains)
Gene: GMPPB

Protein: Mannose-1-phosphate guanylyltransferase catalytic subunit beta (EC 2.7.7.13) (GDP-mannose pyrophosphorylase B) (GTP-mannose-1-phosphate guanylyltransferase beta)

3D Structure

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Related Domains

Browse other domains in Hexapep, GMPPB_C →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded left-handed beta-helix(208)

HH-groupTrimeric LpxA-like enzymes(208.1)

TT-groupTrimeric LpxA-like enzymes(208.1.1)

FFamilyHexapep, GMPPB_C(208.1.1.20)

Pfam Families

PF00132Hexapep

Bacterial transferase hexapeptide (six repeats)

ClanCL0536HEXAPEP

PF25087GMPPB_C

GMPPB C-terminal domain

ClanCL0536HEXAPEP

External Links

AlphaFold DB: Q9Y5P6 UniProt: Q9Y5P6

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 246-360