ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P61626_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P61626_F1_nD1

P61626_F1_nD1

UID: 003550898

AlphaFold

Range: 18-148
AlphaFold: AF-P61626
UniProt: P61626 (all domains)
Gene: LYZ

Protein: Lysozyme C (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase C)

3D Structure

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Related Domains

Browse other domains in Lys →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLysozyme-like(235)

HH-groupLysozyme-like(235.1)

TT-groupLysozyme-like(235.1.1)

FFamilyLys(235.1.1.1)

Ligands

in contact, ≤ 4 Å

Aspartic acid
drugDrugBank DB00128within 5 Å only
(R)-Propylene glycol
drugDrugBank DB02159within 5 Å only
4-methyl-umbelliferyl-N-acetyl-chitobiose

Pfam Families

C-type lysozyme/alpha-lactalbumin family

ClanCL0037Lysozyme

External Links

AlphaFold DB: P61626 UniProt: P61626

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 18-148

drugDrugBank DB02759within 5 Å only

DB02772

drugDrugBank DB02772within 5 Å only

Arsanilic acid

drugDrugBank DB03006within 5 Å only

DB03013

drugDrugBank DB03013within 5 Å only

p-Toluenesulfonic acid

drugDrugBank DB03120within 5 Å only

Propyl alcohol

drugDrugBank DB03175within 5 Å only

Cu-Cyclam

drugDrugBank DB03189within 5 Å only

DB03487

drugDrugBank DB03487within 5 Å only

Dodecyl sulfate

drugDrugBank DB03967within 5 Å only

DB04194

drugDrugBank DB04194within 5 Å only

Methylumbelliferyl chitotriose

drugDrugBank DB04268within 5 Å only

UNDECA-3,7-DIENE-1,3,7,11-TETRACARBALDEHYDE

drugDrugBank DB06912within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.