ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q71U36_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q71U36_F1_nD1

Q71U36_F1_nD1

UID: 003552054

AlphaFold

Range: 1-245
AlphaFold: AF-Q71U36
UniProt: Q71U36 (all domains)
Gene: TUBA1A

Protein: Tubulin alpha-1A chain (EC 3.6.5.-) (Alpha-tubulin 3) (Tubulin B-alpha-1) (Tubulin alpha-3 chain) [Cleaved into: Detyrosinated tubulin alpha-1A chain]

3D Structure

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Related Domains

Browse other domains in Tubulin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupTubulin nucleotide-binding domain-like(2003.1.6)

FFamilyTubulin(2003.1.6.1)

Ligands

in contact, ≤ 4 Å

DB00518
drugDrugBank DB00518within 5 Å only
Vinblastine
drugDrugBank DB00570within 5 Å only
Mebendazole

Pfam Families

PF00091Tubulin

Tubulin/FtsZ family, GTPase domain

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q71U36 UniProt: Q71U36

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-245

drugDrugBank DB00643within 5 Å only

Epothilone D

drugDrugBank DB01873within 5 Å only

Patupilone

drugDrugBank DB03010within 5 Å only

2-MERCAPTO-N-[1,2,3,10-TETRAMETHOXY-9-OXO-5,6,7,9-TETRAHYDRO-BENZO[A]HEPTALEN-7-YL]ACETAMIDE

drugDrugBank DB07574within 5 Å only

DB11638

drugDrugBank DB11638within 5 Å only

DB12695

drugDrugBank DB12695within 5 Å only

DB15534

drugDrugBank DB15534within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.