ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P08397_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/P08397_F1_nD3

P08397_F1_nD3

UID: 003557399

AlphaFold

Range: 241-355
AlphaFold: AF-P08397
UniProt: P08397 (all domains)
Gene: HMBS

Protein: Porphobilinogen deaminase (PBG-D) (EC 2.5.1.61) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)

3D Structure

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Related Domains

Browse other domains in Porphobil_deamC →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupPorphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain(330.4)

TT-groupPorphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain(330.4.1)

FFamilyPorphobil_deamC(330.4.1.1)

Pfam Families

PF03900Porphobil_deamC

Porphobilinogen deaminase, C-terminal domain

External Links

AlphaFold DB: P08397 UniProt: P08397

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 241-355