ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P28340_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/P28340_F1_nD4

P28340_F1_nD4

UID: 003558197

AlphaFold

Range: 71-80,311-545
AlphaFold: AF-P28340
UniProt: P28340 (all domains)
Gene: POLD1

Protein: DNA polymerase delta catalytic subunit (EC 2.7.7.7) (3'-5' exodeoxyribonuclease) (EC 3.1.11.-) (DNA polymerase subunit delta p125)

3D Structure

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Related Domains

Browse other domains in DNA_pol_B_exo1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyDNA_pol_B_exo1(2484.1.1.34)

Pfam Families

PF03104DNA_pol_B_exo1

DNA polymerase family B, exonuclease domain

ClanCL0219RNase_H

External Links

AlphaFold DB: P28340 UniProt: P28340

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 71-80,311-545