ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9NRJ5_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9NRJ5_F1_nD3

Q9NRJ5_F1_nD3

UID: 003560369

AlphaFold

Range: 366-500
AlphaFold: AF-Q9NRJ5
UniProt: Q9NRJ5 (all domains)
Gene: PAPOLB

Protein: Poly(A) polymerase beta (PAP-beta) (EC 2.7.7.19) (Polynucleotide adenylyltransferase beta) (Testis-specific poly(A) polymerase)

3D Structure

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Related Domains

Browse other domains in PAP_RNA-bind →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPAP/Archaeal CCA-adding enzyme, C-terminal domain(304.20)

TT-groupPAP/Archaeal CCA-adding enzyme, C-terminal domain(304.20.1)

FFamilyPAP_RNA-bind(304.20.1.1)

Pfam Families

PF04926PAP_RNA-bind

Poly(A) polymerase predicted RNA binding domain

External Links

AlphaFold DB: Q9NRJ5 UniProt: Q9NRJ5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 366-500