ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8NDV3_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q8NDV3_F1_nD3

Q8NDV3_F1_nD3

UID: 003561773

AlphaFold

Range: 1-140,161-190,1026-1230
AlphaFold: AF-Q8NDV3
UniProt: Q8NDV3 (all domains)
Gene: SMC1B

Protein: Structural maintenance of chromosomes protein 1B (SMC protein 1B) (SMC-1-beta) (SMC-1B)

3D Structure

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Related Domains

Browse other domains in SMC_N, AAA_21 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySMC_N, AAA_21(2004.1.1.442)

Pfam Families

RecF/RecN/SMC N terminal domain

ClanCL0023P-loop_NTPase

AAA domain, putative AbiEii toxin, Type IV TA system

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q8NDV3 UniProt: Q8NDV3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-140,161-190,1026-1230