ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q9UPN6_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9UPN6_F1_nD3

Q9UPN6_F1_nD3

UID: 003562675

AlphaFold

Range: 451-600
AlphaFold: AF-Q9UPN6
UniProt: Q9UPN6 (all domains)
Gene: SCAF8

Protein: SR-related and CTD-associated factor 8 (CDC5L complex-associated protein 7) (RNA-binding motif protein 16)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1(304.9.1.1)

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

AlphaFold DB: Q9UPN6 UniProt: Q9UPN6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 451-600